Index

A

ambertools.cpptraj_density module

C

cpptraj_density() (in module ambertools.cpptraj_density)

CpptrajDensity (class in ambertools.cpptraj_density) create_instructions_file() (ambertools.cpptraj_density.CpptrajDensity method)

D

display_fatslim() (in module fatslim.fatslim_membranes)

display_hole() (in module mdanalysis_biobb.mda_hole) display_nglview() (in module lipyphilic_biobb.lpp_assign_leaflets)

F

fatslim.fatslim_apl module fatslim.fatslim_membranes module

fatslim_apl() (in module fatslim.fatslim_apl) fatslim_membranes() (in module fatslim.fatslim_membranes) FatslimAPL (class in fatslim.fatslim_apl) FatslimMembranes (class in fatslim.fatslim_membranes) frame_df() (in module lipyphilic_biobb.lpp_zpositions)

G

gorder.gorder_aa module gorder.gorder_cg module gorder.gorder_ua module

gorder_aa() (in module gorder.gorder_aa) gorder_cg() (in module gorder.gorder_cg) gorder_ua() (in module gorder.gorder_ua) GorderAA (class in gorder.gorder_aa) GorderCG (class in gorder.gorder_cg) GorderUA (class in gorder.gorder_ua)

L

launch() (ambertools.cpptraj_density.CpptrajDensity method) (fatslim.fatslim_apl.FatslimAPL method) (fatslim.fatslim_membranes.FatslimMembranes method) (gorder.gorder_aa.GorderAA method) (gorder.gorder_cg.GorderCG method) (gorder.gorder_ua.GorderUA method) (lipyphilic_biobb.lpp_assign_leaflets.LPPAssignLeaflets method) (lipyphilic_biobb.lpp_zpositions.LPPZPositions method) (mdanalysis_biobb.mda_hole.MDAHole method)

lipyphilic_biobb.lpp_assign_leaflets module lipyphilic_biobb.lpp_zpositions module lpp_assign_leaflets() (in module lipyphilic_biobb.lpp_assign_leaflets) lpp_zpositions() (in module lipyphilic_biobb.lpp_zpositions) LPPAssignLeaflets (class in lipyphilic_biobb.lpp_assign_leaflets) LPPZPositions (class in lipyphilic_biobb.lpp_zpositions)

M

main() (in module lipyphilic_biobb.lpp_zpositions) mda_hole() (in module mdanalysis_biobb.mda_hole) MDAHole (class in mdanalysis_biobb.mda_hole) mdanalysis_biobb.mda_hole module module ambertools.cpptraj_density fatslim.fatslim_apl fatslim.fatslim_membranes gorder.gorder_aa gorder.gorder_cg gorder.gorder_ua lipyphilic_biobb.lpp_assign_leaflets lipyphilic_biobb.lpp_zpositions mdanalysis_biobb.mda_hole

P

parse_index() (in module fatslim.fatslim_membranes)